Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLYIFEKNIILRKILITFSLIIIFLLGRYVPIPGVLISAYKGQDNNFATLYSTVTGGNLSQVGVFSLGIGPMMTTMILLRLFTIGKYSSGVSQKVQQFRQNVVML-----VIAIIQGLAIAISFQYHNGFSLTKLLLATMILVT---GAYIISWIGNLNAEYGFG---------GMTILVVVGMLVGQFNNIPLIFELFQDGYQLAIILFLLWTLVAMYLMITFERSEYRIPVMRTSIHN-------RLVDDAYMPIKVNASGGMAFMYVYTLLMFPQYIIILLRSIFPTNPDITSY--NDYFSLSSIQG----VVIYMILMLVLSVAFTF-----VNIDPTKISEAMRESGDFIPNYRPGKET-----QSYLSKICYLFGTFSGF------FMAFLGGVPLLFALGNDDLRTVSSMTGIFMMITGMSFMILDEFQVIRIRKQYTSVFENEEN |
| 2YXQ Chain:A ((72-409)) | -------------------------------------------------------------------TLGIGPIVTAGIIMQLLV----GSGIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVLFVGAGAFGILTPLLAFLVIIQIAFGSIILIYLDEIVSKYGIGSGIGLFIAAGVSQTIFVGALGPEGYLWKFLNSLIQGVPNIEYIAPIIGTIIVFLMVVYAECMRVEIPLAHGRIKGAVGKYPIKFVYVSNIPV-ILAAALFANIQLWGLALYRMGIPILGHYEGGRAVDGIAYYLSTPYGLSSVISDPIHAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIGSLGMAIKGFRKSEKAIEHRLKRYIPPLTVMSSAFVGFLATIANFIGALGG-------GTGVLLTVSIVYRMYEQLLREKVSELHPAIAKL-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183978 for 1952 contacts (-94.3/contact) +
2D Compatibility (PS) -30099 + (NN) -12353 + (LL) 7788
1D Compatibility (HY) -28400 + (ID) 3700
Total energy: -250742.0 ( -128.45 by residue)
QMean score : 0.125
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