Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIYKIIASLFLVLIPIFSQVLVKIFKLKKFNIMFPDVAFPIFVFLIPLISSSLLKQNLLPYYLILISLLAIGITIKLLRTKTL--FSYKRFLKLFWRSGFILTFLFYLGLLVIIFIKVQ
2EAQ Chain:A ((1-89))
-----------------------QFSDMRISINQTPGKSLDFGFTIKWDIPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQET-------GHLVMDVRRYG
General information:
TITO was launched using:
RESULT:
Template:
2EAQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103239 for 575 contacts (-179.5/contact) +
2D Compatibility (PS) -8831 + (NN) 3412 + (LL) 3996
1D Compatibility (HY) 2400 + (ID) 600
Total energy: -102862.0 ( -178.89 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_2EAQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EAQ-query.scw
PDB file :
Tito_Scwrl_2EAQ.pdb
: