Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKKILIIEDEKNLARFVSLELLHEGYDVVVETNGREGLDTALEKDFDLILLDLMLPEMDGFEITRRLQAEKTTYIMMMTARDSVMDIVAGLDRGADDYIVKPFAIEELLARVRAIFRRQEIETKTKEKGDSGSFRDLSLNTHNRSAMRGDEEISLTKREFDLLNVLMTNMNRVMTREELLEHVWKYDVAAETNVVDVYIRYLRGKIDIPGRESYIQTVRGMGYVIREK
1NXW Chain:A ((2-119))
--KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRS-------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1NXW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75218 for 953 contacts (-78.9/contact) +
2D Compatibility (PS) -13204 + (NN) -10514 + (LL) 8024
1D Compatibility (HY) -11200 + (ID) 2750
Total energy: -104862.0 ( -110.03 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_1NXW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NXW-query.scw
PDB file :
Tito_Scwrl_1NXW.pdb
: