Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKHIVLGLALTTLLGVTFSNQEVSASSTSSKVVKVGVMTFSDTEKARWDKIEKLVGDKAKIKFTEFTDYTQPNQATANKDVDINAFQHYNFLENWNKENKK-NLIPLEKTYLAPIRIYSEKVKSLKKLKKGATIAIPNDATNGSRALYVLQSAGLIKLNVSGKKV-ATVANITSNKKDINIQELDASQTPRAL--KDVDAAIINNTYIEQANLKP-SDAIFVEKSDKNSKQWINIIAGRKNWKKQKNAKAIQAILDAYHTDEVKKVIKDTSADIPQW |
| 4GOT Chain:A ((35-237)) | --------------------------------------------------------------LKVKVLSDYKMYNKALADKEVDANYFQHIPYLEQEMKENTDYKLVNAGAVHLEPFGIYSKTYKSLKDLPDGATIILTNNVAEQGRMLAMLENAGLITLDSKVETVDATLKDIKKNPKNLEFKKVAPELTAKAYENKEGDAVFINVNYAIQNKLNPKKDAIEVESTKNNP--YANIIAVRKG---EEDSAKIKALMEVLHSKKIKDFIEKKYDGAVLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GOT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45028 for 1484 contacts (-30.3/contact) +
2D Compatibility (PS) -20898 + (NN) -4421 + (LL) 5328
1D Compatibility (HY) -15600 + (ID) 3800
Total energy: -84419.0 ( -56.89 by residue)
QMean score : 0.390
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