Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIFDKSMKLEHVAYDIRGPVLEEADRMRAN---------GEKILRLNTGNPAAFG-------------FEAPDEVIRDLITN------------------ARESEGYSDSKGIFSARKAVMQYYQLQN-IHVDMDDIYIVNGVSEGISMSMQALLDND-DEVLVPMPDYPLWTACVSLAGGNAVHYICDEEANWYPDIDDIKSKITS------KTKAIVLINPNNPTGAVYPREILQEIVDIARQNDLIIFSDEVY-DRLVMDGMEHIPIASIA-------EDIFTVTLSGLSKSHR-ICGFRVGWMVLSGPRQHVKGYIEGLNMLANMRLCSN----VLAQQVIQTSLGGQQSIDSMLLPG----GRIYEQRNYIHKAINEIPGLSAVKPNAGLYLFPKIDTDMYRIDN--------DEEFVLNFLKQEKVLLTHGRGFNMNTAD-HFRIVYLPRVDELTELQEKMA----RFLSQYKR |
3TCM Chain:A ((31-499)) | --------KVLKCEYAVRGEIVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVR---EQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFMSEYR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TCM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179614 for 3179 contacts (-56.5/contact) +
2D Compatibility (PS) -43301 + (NN) -22479 + (LL) 1000
1D Compatibility (HY) -30800 + (ID) 5900
Total energy: -281094.0 ( -88.42 by residue)
QMean score : 0.518
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