Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGFEQRLTRCQTAISQLSCDALLITNLTNIFYLTGFSGTNATVLISPKHRIFVTDSRYALIAKNTVREFDIIISREPLAAILKIIRDDALMAIGFETDISYHMYKHMVEVFEDYRLIEAPSVVEKLRMIKDATELAIIRQACRISDQAFLDVLDFIKPDRTTELQVANFLDFRMRELGATGPSFDFIVASGYRSAMPHGVASQKTIQSGEALTLDFGCYYQHYVSDMTRTIHI-GHVTDQEREIYDIVLKSNQA----------------------IIDNVKSGMKRCDYDYLARQVIENSGYGNHFTHGIGHGMGLDVHEIPYFGKSEG-VIASGMVVTDEPGIYL------DNKY---GVRIEDDLLITETGCEVLTSA----PKELIVL |
| 1N51 Chain:A ((162-433)) | -------------------------------------------------------------------------------------------------------------------MIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPG-MFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGCILHYTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVD----ELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDAEVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N51.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79484 for 1857 contacts (-42.8/contact) +
2D Compatibility (PS) -25382 + (NN) -8892 + (LL) 10664
1D Compatibility (HY) -18400 + (ID) 4250
Total energy: -125744.0 ( -67.71 by residue)
QMean score : 0.438
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