Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKIALFAGGDLTYFE----YDFDYFVGIDRGSLFLLKNGLSLDMAVGDFDSITEDELLYIKHYCSNIVSASAEKNDTDTELALKTIFKE-FPEAQVTVFGAFGGRIDHMMSNIFLPSDTDLEPFMSQIRLKDEQNIVTYLPSGKNQVSR-IEGMSYVSFMPE-SESTLQISGAKYELNKSNYFKK-KMYSSNEFMTSPIEVELKDGYLIIIYSKDRG
3MEL Chain:A ((2-213))
-SRVLLVAGGNPSDWPTIEPATYDYFVGIDRGCLHLLEADLPLQLAVGDFDSLSREEYHFVQETTETLIQAPAEKDDTDTQLALQEALQRFPQ-AEMTIIGATGGRIDHLLANLWLPFEPRFQGVLRQIRLCDRQNSIQYYAPGSYI-VPKEPDKEYLAYCCLTPVENLTLRRSKYLLTNQDVPYPTS-YASNEFIEEAAAFSFDAGMIAVIQSKDK-
General information:
TITO was launched using:
RESULT:
Template:
3MEL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117836 for 1591 contacts (-74.1/contact) +
2D Compatibility (PS) -22181 + (NN) -13190 + (LL) 812
1D Compatibility (HY) -17600 + (ID) 3700
Total energy: -173695.0 ( -109.17 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_3MEL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MEL-query.scw
PDB file :
Tito_Scwrl_3MEL.pdb
: