Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDVLIIEDDPMVEFIHRNYLEKLNYFQNIYSTASQTQAIAYLNDIKIQLVLLDIHIKEGNGLELLKLLRNQHQNTEVIVISAANEAHTVKEAFHLGIVDYLIKPFTFERFESSIEKFLNHYHTFEADKIYQDNIDHFQKIDSGWLEGEVKLDEKGLSEITYQHILDAIQELEQPFTIQELAKCSQFSHVSVRKYIAYMEEKGLLTSQQIYTKVGRPYKVYKLIKKT
2FSP Chain:A ((6-119))
--ILIVDDQYGIRILLNEVFNKEGY--QTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN-------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2FSP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106679 for 873 contacts (-122.2/contact) +
2D Compatibility (PS) -12459 + (NN) -5806 + (LL) 8364
1D Compatibility (HY) -11200 + (ID) 1550
Total energy: -129330.0 ( -148.14 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_2FSP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FSP-query.scw
PDB file :
Tito_Scwrl_2FSP.pdb
: