Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKCLTLNTHSWMEVN------ALKKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAIL---SLKPL-KPEDILVSAVDD-----ETDYHTRRALVAETTL--NDKVVTVVSLHLSWF-EKGFAEEWKRLETTLLE----VETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHV-FGDHTIMADIDGWE-GNKKALKVDHIFTSEDLSISSSQVVFEG--------GEAPVVSDHYGLEITMDF |
| 3MPR Chain:A ((6-289)) | SLTVASYNLRNANGSDSARGDGWGQRYPVIAQMVQYHDFDIFGTQECFLHQLKDM-------------------------KEALP--GYDYIGV--GRDDG-KDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAVLPRICSWGHFKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQEKMKELGRGKNLPAILTGDFNVDQTHQSYDAFVSKG-VLCDSYEKCDYRYALNGTFN----NFDPNSFTESRIDHIFVSPSFHVKRYGVLTDTYRSVREKAYEARTPSDHFPVKVELVF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -115043 for 1945 contacts (-59.1/contact) +
2D Compatibility (PS) -25123 + (NN) -3195 + (LL) 2112
1D Compatibility (HY) -5200 + (ID) 2300
Total energy: -148749.0 ( -76.48 by residue)
QMean score : 0.341
|
|
|