Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKIYTISSCTSCKKAKTWLNAHQLPYKEQNLGKESLTRDEILEILTKTE-SGIESIVSSKNRYAKALNCNIEELSVNEVIDLIQENPRILKSPILIDDKRLQVGYKEDDIRAFLPRSIRNVENAEARLRAAL
3RDW Chain:A ((45-120))
---------------------------------------DKLKELLQQLGFSDARQLMRTKEDLYKTLNLDDRGLTQDQLLQAMADNPKLIERPIVVTQGKARIGRPPEQVLEIL------------------
General information:
TITO was launched using:
RESULT:
Template:
3RDW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42585 for 476 contacts (-89.5/contact) +
2D Compatibility (PS) -8015 + (NN) -2663 + (LL) 4468
1D Compatibility (HY) -5600 + (ID) 750
Total energy: -55145.0 ( -115.85 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_3RDW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RDW-query.scw
PDB file :
Tito_Scwrl_3RDW.pdb
: