Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNKVQERRERKIKEAIKAKNWDEVTRL-LQQEQSNAERRD--RYHNRRIKDETIASKNAKKSVRYDVIASSDLNPEEALILEELRQAIREAKASLSEIDSKIVEMIAEQ-GSSYKETARYITEHYKKMSDVTVKSHYCKALKKLAPLLKAYR
1XJL Chain:A ((16-132))
------ERDALNIETAIKTKGVDEVTIVNILTNRSNEQRQDIAFAYQRRTKKELASALKSALSGHLETVILGLLKTPAQYDASELKASMK----GLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALAKGR
General information:
TITO was launched using:
RESULT:
Template:
1XJL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 32181 for 712 contacts (45.2/contact) +
2D Compatibility (PS) -12072 + (NN) -3521 + (LL) 932
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: 10770.0 ( 15.13 by residue)
QMean score : 0.241
(partial model without unconserved sides chains):
PDB file :
Tito_1XJL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XJL-query.scw
PDB file :
Tito_Scwrl_1XJL.pdb
: