Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITYQEFLSEKDSLSFEVCTQYFQDLVNSLDEVDEYSIIYWKDFITASLIYSQSRGEWLLLSREEKHAKDDTRTTKHNKFIYTLKIYIAYSKQKGYEFPWFESIKDNRKQLGDLACYIAYIYAVNAR
3EH9 Chain:A ((102-126))
-----DFLAEK-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE
General information:
TITO was launched using:
RESULT:
Template:
3EH9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7353 for 95 contacts (-77.4/contact) +
2D Compatibility (PS) -2424 + (NN) -12 + (LL) 600
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -11639.0 ( -122.52 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_3EH9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EH9-query.scw
PDB file :
Tito_Scwrl_3EH9.pdb
: