Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTTLITTFQERFGDWTQSLIEHLQLSLLTLILATLIAIPLGIIISHYKKISHVVLQITGIFQTIPSLALLGLFIPFMGIGTVPAVVALIIYALFPILQNTVTVLMQIDANLIEAATAFGMTRWERLKKFELALSMPVIISGIRTASVMIIGTATLASLIGAGGLGSFILLGIDRNNPSLILIGAISSAVLAIIFSGLIGLLEKARLRTIAVSGILLLAGLGLSYAPKWMPGTNTATITVAGKLGTEPDILINMYKELIEDQTDIKVKLKPNFGKTTFLYQALKSGDIDLYPEFTGTITSSLLKNPPKVSNNPKQVYNLAKNGILKQDKLSLLSPMAYQNTYAVAVKKDYAEANQLKNISDLKKLDKLKAGFTL------EFKDREDGSIGLQKHYG--------LNLDISTLEPALRYQAINSKDVNIIDAYSTDSELIQYQLQILKDDKHLFPPYQGAPLLRQDTIKKYPQVKKALNKLAGHITEKEMQEMNYQVAVKHKSAATVAKQYLKAHHIIK
4NE4 Chain:A ((6-286))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQVVVSSKIDTEGGVLGNIILAVL-NQNKIETTDRIQLGATPVVRKAITAGEIDIYPEYTGNAAFFFSKADDPLWKDAAKGYEEAKTLDYDANKIVWLAPSPANNTWAIALRKDVADKNNLKTLSDFGKY--VAGGGTVVLAASSEFVNSAAALPAFQTTYGFTMKPDQLITLSGGDTAATIAAAANQTNNANAAMVYGTDGGIAPSGLVVLEDDKHVQPVYQPAPIIREEVLKKHPNIEELLKPVFEKLDLATLQDLNARVQVGGEQAKTVAMDFLTKNGFAK


General information:
TITO was launched using:
RESULT:

Template: 4NE4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -75570 for 2283 contacts (-33.1/contact) +
2D Compatibility (PS) -28608 + (NN) -7178 + (LL) 20844
1D Compatibility (HY) -14800 + (ID) 3950
Total energy: -109262.0 ( -47.86 by residue)
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_4NE4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NE4-query.scw
PDB file : Tito_Scwrl_4NE4.pdb: