Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSFMHSKAVIFSFTMAFFLILAACSGKNEADSKDTGWEQIKDKGKIVVATSGTLYPTSYHDTDSGSDKLTGYEVEVVREAAKRLGLKVEFKEMGIDGMLTAVNSGQVDAAANDIDVTKDREEKFAFSTPYKYSYGTAIVRKDDLSGIKTLKDLKGKK-AAGAATTVYMEVARKYGAKEVIYDNATNEQYLKDVANGRTDVILNDYYLQTLALAAFPDLNITIHPDIKYMPNKQ-ALVMKKSNAALQKKMNEALKEMSKDGSLTKLSKQFFNKADVSKKIDADVQDVDL
4PSH Chain:A ((3-225))--------------------------------------DEIKSRGYLLVGLSADFPPFEFVDENG---NIVGFDVDLAKEIARRLGVELKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVAFSDPYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKYDGIKVVRFDKFTDA--FLELKRGRADAVVLDSATARAFVAKNPDLVISSG----VLSSEQYGIAVRKEDTDLLEFINSVLRELKKSPYDVLIEKWF-------------------


General information:
TITO was launched using:
RESULT:

Template: 4PSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1110 -103781 -93.50 -469.60
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -93.50
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_4PSH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PSH-query.scw
PDB file : Tito_Scwrl_4PSH.pdb: