Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPYIILEDQTRLYYETHGSGTPILFIHGVLMSGQFFHKQFSVLSAN-YQCIRLDLRGHGESDKVLHGHTISQYARDIREFLNAMELDHVVLAGWSMGAFVVWDYLNQFGNDNIQAAVIIDQSASDY-QWEGWEHG-PFDF------DGLKTAMHAIQTDPLPFYESFIQNMFAEPPAETETEWMLAEILKQPAAISSTILFNQTAADYRGTLQNINVPALLCFGEDKKF--FSTAAGEHLRSNIPNATLVTFPKSSHCPFLEEPDAFNSTLLSFLDGVIGKS
3T4U Chain:A ((4-269))----VAKDGTQIYFKDWGSGKPVLFSHGWILDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFY-GINKGQVVSQGVQTQT-LQIALLASLKATVDCVTAFAET--DFRPDMAKIDVPTLVIHGDGDQIVPFET-TGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFL-------


General information:
TITO was launched using:
RESULT:

Template: 3T4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1521 -175916 -115.66 -689.87
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -115.66
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.431

(partial model without unconserved sides chains):
PDB file : Tito_3T4U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3T4U-query.scw
PDB file : Tito_Scwrl_3T4U.pdb: