Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIQDMILTLQKHWSSQGCVLMQAYDVEKGAGTMSPYTFLRSIGPEPWKVAYVEPSRRPADGRYGENPNRLYQHHQFQVIIKP---SPDNIQELYLDSLRALGIDPLEHDIRFVEDNWENPSLGCAGLGWEVWLDGMEITQFTYFQQV----GGLECKPVSVEITYGIERLASYIQDKENVFDLEWTSGFTVKDLFMMAEYEHSVYTFETSDVDMLFQLFSTYEKEAIKQMDNGLVHPAYDYVLKCSHTFNLLDAKGAISVTERTGYIARVRNLARKVAKTYYEEREKLGFPMLKGEGSSHE
4CS4 Chain:A ((131-256))--------------------------------------------PDPIKIFEIGPCYRKESDG----KEHLEEFTMLNFCQMGSGCTRENLESIITDFLNHLGID-----FKIVGDSCMVF-----GDTLDVMHGDLELSSAVVGPIPLDREWGID-KPWIG-AGFGLERLLKVKHDFKNIKRAAR--------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4CS4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 466 -13678 -29.35 -114.94
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -29.35
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_4CS4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CS4-query.scw
PDB file : Tito_Scwrl_4CS4.pdb: