Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPFGFTPKARHNRGVALRSTYRLDGWVMGPVDKEGWGLSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQQFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFNQ-------NTAIIMGGTGSPIPTPSYVNAITTLFIDPVV---SNPVVKALVTPEELYPITGVKSLPFQTSVQLG-LQILDGAIWEQINAGNHVTVFGYSQSAVIASLEMQHLISLGPNAPSPSQLNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALVAGTQQGVNDFMVELPAALNTLPQTPMPAFPPYVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAATIGLAALGGMIEFIAIVVTLADITQQLQSFSI |
| 1EFL Chain:A ((365-471)) | ------------------------------------------------------------------------------------------------------------------------------------------------FTHSAPESIPDTFEDAVNILKPSTIIGVAGAGR-LFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTLTEGRCL-FASGSPFGPVKLTDGRVFTP-GQGNNVYIF--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EFL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35967 for 612 contacts (-58.8/contact) +
2D Compatibility (PS) -9960 + (NN) -1823 + (LL) 30496
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -24004.0 ( -39.22 by residue)
QMean score : 0.196
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