Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQAQPRPAAPNPKRNVKAIRTVRFWMAPIATTLALMSALAALYLGGILNPMTNLRHFPIALVNEDAGPAGQQIVDGLVSGLDKNKFDIR--VVSPDEARRLLDTAAVYGSALIPPTFSSQLRDFGASAVTPTRTDRPAITIST--NPRAGTLAASIAGQTLTRALTVVNGKVGERLTAEVAAQTGGVALAGAAAAGLASPIDVKSTAYNPLPNGTGNGLSAFYYALLLLLAGFTGSIVVSTLVDSMLGYVPAEFGPVYRFAEQVNISRFRTLLVKWAVMVVLALLTSGVYLAIAHGLGMPIPLGWQVWLYGVFAIIAVGVTSSSLIAVLGSMGLLVSMLIFVILGLPSAGATVPLEAVPAFFRWLAQFEPMHQVFLGVRSLLYLNGNADAGLSQALTMTSIGLIIGLLLGGFITHLYDRSSFHRIPGAVEMAIAVEHQAQYQARQSARESSSEQP |
| 3CNI Chain:A ((11-111)) | ---------------------------------------------------------QKVAIVREDTGTIAELAEKALGN-----MVDIVYAGSDLKEAEEAVKKEKAPAIIVIPKGFSQSLES----------GEKARLEIVWYLRGTG--LSEAVSTGTISSLIESLKVQLAS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CNI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42376 for 670 contacts (-63.2/contact) +
2D Compatibility (PS) -10018 + (NN) -1345 + (LL) 26668
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -31571.0 ( -47.12 by residue)
QMean score : 0.451
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