Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDHLTACAAVHPGPLVSHLSVMHRFRIYVDIAVVVLVLVLTNLIAHFTTPWASIATVPAAAVGLVILVRSRGLGWAELGLSRQHWKSGLVYALAAVALVVAVISVGVLLPITRPMFMNHHYATISGAVIASMVMIPLQTVIPEELAFRGVLHGALNRAWGFRGVAVAGSVLFGLWHIATSLGLTSSNVGFTRLFGGGIIGLVAGVMLAVLATGVAGFVFSWLRRRSGSLIAPIALHWS----LNGMGALAAALVWHLST |
| 4WNW Chain:A ((34-76)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YCFDQLRRRFGDVFS-LQLAWTPVVVLNGLAAVREALVTH--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4WNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -12853 for 153 contacts (-84.0/contact) +
2D Compatibility (PS) -3780 + (NN) -312 + (LL) 18704
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -3841.0 ( -25.10 by residue)
QMean score : -0.054
|
|
|