Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPDPD---VLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA |
3OYR Chain:A ((46-343)) | ----------------------MQSDVAIIPALAEHLIAAGGKRLRPLMTV-----AAARLAGADNDHFQKLAAAVEFIHTATLLHDDVV---------VAAHLIW----------------GGAQSVLVGDFLFARAFELMVE-TNSMKALEILARASRVIAE-------GEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEAL-RDYGLNLGLAFQLADDALDY-------------------ATLPLLLAIA---RSGPREAEFWERAIG---TEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPANDWREA-LEELADFAVSR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136763 for 2130 contacts (-64.2/contact) +
2D Compatibility (PS) -29286 + (NN) -19500 + (LL) 4212
1D Compatibility (HY) -10800 + (ID) 4300
Total energy: -196437.0 ( -92.22 by residue)
QMean score : 0.429
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