Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMQQAVSGITGALGGAVGGVMGPLTQLPQQAMQAGQGAMQPLMSALQQTYGAEGLDVADGARLVDSIEGEPGLGGEPGAGDVGAGGGGGGTTPTGYLGPPPVPTSSPPTTPAGAPAKSVTPDPVSGTPRASGPAGMTGMPMVPPGALGAGAEGANKDKPVEKRVTGCAEWSTGQGPLNSTAECSGEICRRQAGGHQVDATDPCCAERRQG |
| 3V9M Chain:A ((26-49)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCYCGWGGSGTPVDELDRCCQVHD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2588 for 133 contacts (19.5/contact) +
2D Compatibility (PS) -2195 + (NN) 1917 + (LL) 2868
1D Compatibility (HY) -2000 + (ID) 400
Total energy: 2778.0 ( 20.89 by residue)
QMean score : 0.339
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