Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTISKTKSSFYRRLYVAYLIDSGTASVPEIMAATGMPRRTAQDTIAALEELDIVCEFEQREGARNHQGGYVIRDWGAVRREWVVEQHRRIAAALEYPAD
2VXZ Chain:A ((8-68))
-------EVLVRLRDILALLADGCKTTSLIQQRLGLSHGRAKALIYVLEKEGRVTR-VAFGNVA----LVCLSMDQYRQLVDGMIREVERLVTTNKLKF
General information:
TITO was launched using:
RESULT:
Template:
2VXZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34268 for 386 contacts (-88.8/contact) +
2D Compatibility (PS) -6690 + (NN) -830 + (LL) 660
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -43628.0 ( -113.03 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_2VXZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VXZ-query.scw
PDB file :
Tito_Scwrl_2VXZ.pdb
: