Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLPAAPKVPPQVAEQAVRWLVELQGGADDERLRQAWQRWRQAAPEHEQAWRHIEAVNQRLAGIGTPLALAAINAPHSPQRRRALKTLLLVLAAGGSAWGLRESGSLQRWSADYATGVGERRRLALADGSRLELNSDTAVDVRFDAGERRLLLLRGEIQLSTGHDPRPLHVYSAEGRLRPVGTRFDVRQFAGRTRVAVHEGAVQVENRAGQGLLLPSGRQLDFDRERLGAPQPLPVGSGAWTDGMLVAAGMRLDEFLAEVARYRPGRLGCDPRIGGLRISGSYPLDDSERILATLPAVLPVEVRRVTRYWVGVHPRE |
| 4Q2D Chain:A ((90-210)) | --------------EDAERWLAFFAGGHDIGKASPAFQ--LQLRPEQGR-----ELVARRLRDAGLPLFNA--RAPHGTISANVLETVL------ADVFGL--SGRSARWVA-FAVG-GHHGFVPSYDEVRRDLDQQAVGWGMWDAA-REVLLCR------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q2D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29757 for 883 contacts (33.7/contact) +
2D Compatibility (PS) -12593 + (NN) -2829 + (LL) 11968
1D Compatibility (HY) -4400 + (ID) 2300
Total energy: 19603.0 ( 22.20 by residue)
QMean score : 0.112
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