Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRGDKSKYSDKQQRKAEHIEESYKAKGVSESEAEARAWATVNKQSGGGERKGGSGRAKSETAKRADRKDSAHRAAQARSGRPANRGSASRGKRQGSTSVSEMTREELMQLARKRDIRGRSTMRKAELIEALSRA
1JJR Chain:A ((59-94))
-------------------------------------------------------------------------------------------------GTLGKFTVPMLKEACRAYGLKSG--LKKQELLEALTKH
General information:
TITO was launched using:
RESULT:
Template:
1JJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10124 for 215 contacts (-47.1/contact) +
2D Compatibility (PS) -4110 + (NN) -3234 + (LL) 3840
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -16478.0 ( -76.64 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_1JJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JJR-query.scw
PDB file :
Tito_Scwrl_1JJR.pdb
: