Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEVRNLLKVFDTRGQVVRAVDDVSTRVARGEVLVVIGPSGSGKSTFLRCLNGLEEFDEGSVSIDGVDL------------ADPRTDINAYRREVGMVFQHFNLFPHMTVLENLCLAQRVVRKRGKAEREAKARAL--LAKVGIGQKAD-EYPSRLSGGQQQRVAIARALCMDPKVMLFDEPTSALDPEMVGEVLDVMKTLAVEGMTMVCVTHEMGFAREVADRVLFFDHGKLLEDAPPAQFFDNPQDPRAQAFLRQVL
1B0U Chain:A ((25-254))
-----------------------VSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKVAD-KNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAP--IQVLGLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGDPEQVFGNPQSPRLQQFLK---
General information:
TITO was launched using:
RESULT:
Template:
1B0U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134660 for 1681 contacts (-80.1/contact) +
2D Compatibility (PS) -23991 + (NN) -16800 + (LL) 2800
1D Compatibility (HY) -22800 + (ID) 6200
Total energy: -201651.0 ( -119.96 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_1B0U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B0U-query.scw
PDB file :
Tito_Scwrl_1B0U.pdb
: