Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTRVYERA
4A1H Chain:A ((2-132))
MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKSGDIITIRTESTFKNTEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKMKGVVCTRIYEK-
General information:
TITO was launched using:
RESULT:
Template:
4A1H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42788 for 945 contacts (-45.3/contact) +
2D Compatibility (PS) -14802 + (NN) -4023 + (LL) 144
1D Compatibility (HY) -11600 + (ID) 4400
Total energy: -77469.0 ( -81.98 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_4A1H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A1H-query.scw
PDB file :
Tito_Scwrl_4A1H.pdb
: