Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNLIISVEGDLVVIRSESTFKNTEISFKLGVEFDEITPDDRKVKSIITLDGGVLVHVQKWDGKSTTIKKRRDGDKLVVECVMKGVTSTRVYERA
3P6C Chain:A ((8-139))
MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTRVYERA
General information:
TITO was launched using:
RESULT:
Template:
3P6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40415 for 943 contacts (-42.9/contact) +
2D Compatibility (PS) -14975 + (NN) -5695 + (LL) 0
1D Compatibility (HY) -17200 + (ID) 5850
Total energy: -84135.0 ( -89.22 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_3P6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P6C-query.scw
PDB file :
Tito_Scwrl_3P6C.pdb
: