Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPSTIQTLTLFLTSGGVLLSLYVSASLSYLLYSDILLRFSSKITAPTMTLDCANASNVQAVNRSATKEMTFLLPEPEWTYPRLSCQGSTFQKALLISPHRFGEARGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTREDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGREWTYIGVDGPDSNALIKIKYGEAYTDTYHSYANNILRTQESACNCIGGDCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVEHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESD-GDKGRGGIKGGFVHQRMASKIGRWYSRTMSKTERMGMELYVKYDGDPWTDSDALAPSGVMVSMKEPGW---YSFGFEIKDKKCDVPCIGIEMVHDG--GKKTWHSAATAIYCLMGSGQLLWDTVTGVDMAL |
| 4KS3 Chain:A ((33-366)) | ---------------------------------------------------------------------------------------------------------------FVIREPFVSCSPIECRTFFLTQGSLLNDKHSNGTVKDRSPFRTLMSVKVGQSPNVYQARFEAVAWSATACHDGKKWMTVGVTGPDSKAVAVIHYGGVPTDVINSWAGDILRTQESSCTCIQGDCYWVMTDGPANRQAQYRIYKANQGRIIGQADISFNGGHIEECSC-YPNDGKVECVCRDNWTGTNRPVLVISPDL-SYRVGYLCAGIPSDTPRGEDAQFTGSCTSPMGNQGYGVKGFGF---RQGTDV--WMGRTISRTSRSGFEILRIKNGWTQTSKEQVRKQVVVDNLNWSGYSGSFTLPVELSGKDCLVPCFWVEMIRGKPEEKTIWTSSSSIVMC------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KS3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105120 for 2849 contacts (-36.9/contact) +
2D Compatibility (PS) -34080 + (NN) -6382 + (LL) 8808
1D Compatibility (HY) -23600 + (ID) 6300
Total energy: -166674.0 ( -58.50 by residue)
QMean score : 0.382
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