Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
1P2T Chain:A ((1-166))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQE----MRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1P2T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102842 for 1317 contacts (-78.1/contact) +
2D Compatibility (PS) -18056 + (NN) -6481 + (LL) 800
1D Compatibility (HY) -22800 + (ID) 8100
Total energy: -157479.0 ( -119.57 by residue)
QMean score : 0.708
(partial model without unconserved sides chains):
PDB file :
Tito_1P2T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P2T-query.scw
PDB file :
Tito_Scwrl_1P2T.pdb
: