Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKPNVAIIVAALKPALGIGYKGKMPWRLRKEIRYFKDVTTRTTKPNTRNAVIMGRKTWESIPQKFRPLPDRLNIILSRSYENKIIDDNIIHASSIESSLNLVSDVERVFIIGGAEIYNELINNSLVSHLLITEIEHPSPESIEMDTFLKFPLESWTKQPKSELQKFVGDTVLEDDIKEGDFTYNYTLWTRK
4H95 Chain:A ((1-189))
---PNVAIIVAALKPALGIGYKGKMPWRLRKEIRYFKDVTTRTTKPNTRNAVIMGRKTWESIPQKFRPLPDRLNIILSRSYENEIIDDNIIHASSIESSLNLVSDVERVFIIGGAEIYNELINNSLVSHLLITEIEHPSPESIEMDTFLKFPLESWTKQPKSELQKFVGDTVLEDDIKEGDFTYNYTLWTRK
General information:
TITO was launched using:
RESULT:
Template:
4H95.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156750 for 1396 contacts (-112.3/contact) +
2D Compatibility (PS) -20254 + (NN) -4662 + (LL) 244
1D Compatibility (HY) -27200 + (ID) 9400
Total energy: -218022.0 ( -156.18 by residue)
QMean score : 0.761
(partial model without unconserved sides chains):
PDB file :
Tito_4H95.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H95-query.scw
PDB file :
Tito_Scwrl_4H95.pdb
: