Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRRSLHAAAVLLLVILKEQPSSPAPVNGSKWTYFGPDGENSWSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSDMHIQGLQ-----SRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFSQVQVCTAAGLSLGIILSLALAGILGICIVVVVSIWLFRRKSIKKGDNKGVIYKPATKMETEAHA |
| 1JV0 Chain:A ((5-260)) | -------------------------------WGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVS-YNPATAKEII--NVGHSFRVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNE-HGSEHTVDGVKYSAELHVAHWNSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNFDPSTLLPS-SLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVP--MQHNNRPTQPLKGRTVRASF----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109714 for 2042 contacts (-53.7/contact) +
2D Compatibility (PS) -26899 + (NN) -17661 + (LL) 8016
1D Compatibility (HY) -13600 + (ID) 4750
Total energy: -164608.0 ( -80.61 by residue)
QMean score : 0.387
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