Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSRRVDVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFRGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLLNP
1LOR Chain:A ((14-222))
-------------RLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESI------
General information:
TITO was launched using:
RESULT:
Template:
1LOR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -172528 for 1819 contacts (-94.8/contact) +
2D Compatibility (PS) -22609 + (NN) -7095 + (LL) 1360
1D Compatibility (HY) -29600 + (ID) 10400
Total energy: -240872.0 ( -132.42 by residue)
QMean score : 0.821
(partial model without unconserved sides chains):
PDB file :
Tito_1LOR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LOR-query.scw
PDB file :
Tito_Scwrl_1LOR.pdb
: