Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
1D7H Chain:A ((1-107))
-GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE
General information:
TITO was launched using:
RESULT:
Template:
1D7H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47569 for 785 contacts (-60.6/contact) +
2D Compatibility (PS) -11922 + (NN) -5161 + (LL) 208
1D Compatibility (HY) -12800 + (ID) 4450
Total energy: -81694.0 ( -104.07 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_1D7H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D7H-query.scw
PDB file :
Tito_Scwrl_1D7H.pdb
: