Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKTQETVQRILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKV--LTLDHP---DAVKLFTRQLLELHQGQGLDIYWRDNY--TCPTEEEYKAMVLQKTGGLFGLAVGLMQLF---SDYKEDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAI---WSRPESTQVQNILR---QRTENIDIKKYCVHYLE-DVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHLSKMFKEENE |
| 2Z4W Chain:A ((25-300)) | --------ESLISKPYNHILLK---NFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIEDNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTTKEPLYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPS---GHSLVPFINLLGIIYQIRDDYLNLKDFQ------FAEDITEGKLSFPIVHALNFTKTKGQTEQHNEILRILLLRTSDKDIKLKLIQILEFDTNSLAYTKNFINQL--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105087 for 1848 contacts (-56.9/contact) +
2D Compatibility (PS) -25442 + (NN) -5298 + (LL) 3240
1D Compatibility (HY) -26800 + (ID) 5750
Total energy: -165137.0 ( -89.36 by residue)
QMean score : 0.325
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