Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERPQLDSMSQDLSEALKEATKEVHIRAENSEFMRNFQKGQVSREGFKLVMASLYHIYTALEEEIERNKQNPVYAPLYFPEELHRRAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQKAMALPSSGEGLAFFTFPSIDNPTKFKQLYRARMNTLEMTPEVKHRVTEEAKTAFLLNIELFEELQALLTEEHKDQSPSQTEFLRQRPASLVQDTTSAETPRGKSQISTSSSQTPLLRWVLTLSFLLATVAVGIYAM
4G7L Chain:A ((11-223))
----------QDLSEALKEATKEVHIRAENSEFMRNFQKGQVSREGFKLVMASLYHIYTALEEEIERNKQNPVYAPLYFPEELHRRAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQKAMALPSSGEGLAFFTFPSIDNPTKFKQLYRARMNTLEMTPEVKHRVTEEAKTAFLLNIELFEELQALLTE------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4G7L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93772 for 1683 contacts (-55.7/contact) +
2D Compatibility (PS) -23571 + (NN) -19372 + (LL) 5352
1D Compatibility (HY) -28000 + (ID) 10650
Total energy: -170013.0 ( -101.02 by residue)
QMean score : 0.660
(partial model without unconserved sides chains):
PDB file :
Tito_4G7L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G7L-query.scw
PDB file :
Tito_Scwrl_4G7L.pdb
: