Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADEIAKAQVARPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG
3O1X Chain:A ((12-126))
-----------RPGGDTIFGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKAAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG
General information:
TITO was launched using:
RESULT:
Template:
3O1X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81929 for 824 contacts (-99.4/contact) +
2D Compatibility (PS) -12697 + (NN) -11010 + (LL) 1392
1D Compatibility (HY) -14400 + (ID) 5450
Total energy: -124094.0 ( -150.60 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_3O1X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O1X-query.scw
PDB file :
Tito_Scwrl_3O1X.pdb
: