Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE |
4M9N Chain:A ((10-335)) | ---------TLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSES----KLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPS-----EYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAH------TINKYTIRPL------GEPLPVDSEKDIFD-----YREPKDRSE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M9N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115105 for 2227 contacts (-51.7/contact) +
2D Compatibility (PS) -32485 + (NN) -16357 + (LL) 2128
1D Compatibility (HY) -38400 + (ID) 14950
Total energy: -215169.0 ( -96.62 by residue)
QMean score : 0.688
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