Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTSAPPAVSPNITVLAPGKGPWQVAFIGITTGLLSLATVTGNLLVLISFKVNTELKTVNNYFLLSLACADLIIGTFSMNLYTTYLLMGHWALGTLACDLWLALDYVASNASVMNLLLISFDRYFSVTRPLSYRAKRTPRRAALMIGLAWLVS-FVLWAPAILFWQYLVGERTVLAGQCYIQ-----FLSQPIITFGTAMAAFYLPVTVMCTLYWRIYRETENRARELAALQGSE---------TPGK---GGGSSSSSERSQPGAEGSPETPPGRCCRCCRAPRLLQAYSWKEEEEEDEGSMESLTSSEGEEP---GSEVVIKMPMVDPEAQAPTKQPPRSSPNTVKRPTKKGRDRAG--------KGQKP-RGKEQLAKRKT-------FSLVKEKKAARTLSAILLAFILTWTPYNIMVLVSTFCKDCVPETLWELGYWLCYVNSTINPMCYALCNK-AFRDTFRLLLLCRWDKRRWRKIPKRPGSVHRTPSRQC |
| 3PDS Chain:A ((12-446)) | ---------------------------MGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAACILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAI---NCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGV----ITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMG-ETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCL-KEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIY--CRSPDFRIAFQELLCL------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -112551 for 2865 contacts (-39.3/contact) +
2D Compatibility (PS) -40852 + (NN) -1550 + (LL) 3120
1D Compatibility (HY) -35600 + (ID) 5650
Total energy: -193083.0 ( -67.39 by residue)
QMean score : 0.298
|
|
|