Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVVDSLLVNGSNITPPCELGLENETLFCLDQPRPSKEWQPAVQILLYSLIFLLSVLG---NTLVITVLIRNKRMRTVTNIFLLSLAVSDLMLCLFCMPFNLIPNLLKDFIFGSAVCKTTTYFMGTSVSVSTFNLVAISLERYGAICKPLQSRVWQTKSHALKVIAATWCLSFTIMTPYPI--YSNLVPFTKNNNQTANMCRFLLPN-DVMQQSWHTFLLLILFLIPGIVMMVAYGLISLELYQGIKFEASQKKSAKERKPSTTSSGKYEDSDGCYLQKTRPPRKLELRQLSTGSSSRANRIRSNSSAANLMAKKRVIRMLIVIVVLFFLCWMPIFSANAWRAYDTASAERRLSGTPISFIL--LLSYTSSCVNPIIYCFMNKRFRLGFMATFPCCPNP-GPPGARGEVGEEEEGGTTGASLSRFSYSHMSASVPPQ |
| 2I37 Chain:A ((32-329)) | -----------------------------------AEPWQFS---MLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPM-SNFRFGENHAIMGVAFTWVMALACAAP-PLVGWSRYIP---EGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFT-------------------ESATT------------QK---------------------------------AEKEVTRMVIIMVIAFLICWLP-YAGVAFYIFTHQGSDFG----PIFMTIPAFFAKTSAVYNPVIYIMMN---RNCMVTTLCCGKNPLG------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I37.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198500 for 2062 contacts (-96.3/contact) +
2D Compatibility (PS) -28323 + (NN) -6462 + (LL) 6868
1D Compatibility (HY) -34400 + (ID) 4450
Total energy: -265267.0 ( -128.65 by residue)
QMean score : 0.246
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