Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTEATEQVSWGHYSGDEEDAYSAEPLPELCYKADVQAFSRAFQPSVSLTVAALGLAGNGLVLATHLAARRAARSPTSAHLLQLALADLLLALTLPFAAAGAL-QGWSLGSATCRTISGLYSASFHAGFLFLACISADRYVAIARALPAGPRPSTPGRAHLVSVIVWLLSLLLALPALLFSQDGQREGQRRCRLIFPEGLTQTVKGASAVAQVALGFALPLGVMVACYALLGRTLLAAR----GPERRRALRVVVALVAAFVVLQL----PYSLALLLDTADLLAARERSCPASKRKDVALLVTSGLALARCGLNPVLYAFLGLRFRQDLRRLLRGGSCPSGPQPRRGCPRRPRLSSCSAPTETHSLSWDN |
| 4RWD Chain:A ((132-406)) | --------------------------------------------------VCAVGLLGNVLVM-FGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDF-RTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSP-SWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWT---LVDIDRRDPLVV---AALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182565 for 1994 contacts (-91.6/contact) +
2D Compatibility (PS) -28331 + (NN) -14744 + (LL) 3368
1D Compatibility (HY) -27200 + (ID) 3900
Total energy: -253372.0 ( -127.07 by residue)
QMean score : 0.338
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