Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAVFVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPF---------WAHAGGDPMCKILIGLYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEFVVYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLY-------VQMRKTLRFREQRYSL---FKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNL-DKSVHITKLIATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV |
| 4RWD Chain:A ((125-406)) | ----------------------------------------ITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPF--GELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLI-NICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQ----FPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHI------FVIVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFK----RCFRQLC------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247899 for 1947 contacts (-127.3/contact) +
2D Compatibility (PS) -26174 + (NN) -6572 + (LL) 4800
1D Compatibility (HY) -29200 + (ID) 3700
Total energy: -308745.0 ( -158.57 by residue)
QMean score : 0.315
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