Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEHDYHEDYGFSSFNDSSQEEHQDFLQFSKVFLPCMYLVVFVCGLVGNSLVLVISIFYHKLQSLTDVFLVNLPLADLVFVCTLPFWAYAGIHE-WVFGQVMCKSLLGIYTINFYTSMLILTCITVDRFIVVVKATKA--YNQQAKRMTWGKVTSLLIWVISLLVSLPQIIYGNVFNLD-KLICGYHDEAIS----TVVLATQMTLGFFLPLLTMIVCYS----VIIKTLLHAGGFQKHRSLKIIFLVMAVFLLTQM----PFNLM----KFIRSTHWEYYAMTSFHYTIMVTEAIAYLRACLNPVLYAFVSLKFRKNFWKLVKDIGCLPYLGVSHQWKSSEDNSKTFSASHNVEATSMFQL |
| 4N6H Chain:A ((131-410)) | ------------------------------------LYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAK----AKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCI----ALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237498 for 1929 contacts (-123.1/contact) +
2D Compatibility (PS) -25943 + (NN) -4514 + (LL) 4324
1D Compatibility (HY) -26800 + (ID) 4150
Total energy: -294581.0 ( -152.71 by residue)
QMean score : 0.207
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