Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKLQRRPVAVD-VLLLNLTASDLLLLLF-LPFRMVEAANGMHWPLPFILCPLSGFIFFTTIYLTALFLAAVSIERFLSVAHPLWYKTRPRLGQAGLVSVACWLLASAHCSVVYVIEFSGDISHSQGTNGTCYLEFRKDQLAILLPVRLEMAVVLFVVPLIITSYCYSRLVWILGRGGSHR--RQRRVAGLLAATLLNFLVCFGPYNVSHVVGYICG---ESPAWRIYVTLLSTLNSCVDPFVYYFSSSGFQADFHELLRRLCGLWGQWQQESSMELKEQKGGEEQRADRPAERKTSEHSQGCGTGGQVACAES |
| 4MQT Chain:A ((52-332)) | -------------------------LVTIIGNILVMVSI--KVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIG-YWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPA-ILFWQFIVGVRTVEDGECYIQFFSNA-----AVTFGTAIAAFYLPVIIMTVLY----WHISRASK--PSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIPNTVWTIGY-WLCYINSTINPACYALCNATFKKTFKHLLMC----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221464 for 1862 contacts (-118.9/contact) +
2D Compatibility (PS) -25689 + (NN) -10421 + (LL) 5800
1D Compatibility (HY) -26800 + (ID) 3300
Total energy: -281874.0 ( -151.38 by residue)
QMean score : 0.240
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