Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSAGNGTPWDATWNITVQWLAVDIACRTLMFLK---LMATYSAAFLPVVIGLDRQAAVLNPL---GSRSGVRK--LLGAAWGLSFLLAFPQLFLFHTVHCAGPVPFTQCVTKGSFKAQWQETT----YNLFTFCCLFLLPLTAMAICYSRIVLSVSRPQTRKGSHAPAGEFALPRSFDNCPRVRLRALRLALLILLTFILCWTPYYLLGMWYWFSPTMLTEVPPSLSHILFLLGLLNAPLDPLLYGAFTLGCRRGHQELSIDSSKEGSGRMLQEEIHAFRQLEVQKTVTSRRAGETKGISITSI 3VGA Chain:A ((73-289)) ------------------------ACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWN--NCGQ----SQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGE----RARSTLQKEVHAAKSLAIIVGL-FALCWLPLHIINCFTFFCPD-CSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVL---------------------------------------

General information: TITO was launched using: RESULT: Template: 3VGA.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output 3D Compatibility (PKB) -140731 for 1263 contacts (-111.4/contact) + 2D Compatibility (PS) -20925 + (NN) -11282 + (LL) 5236 1D Compatibility (HY) -18800 + (ID) 2750 Total energy: -189252.0 ( -149.84 by residue) QMean score : 0.270

(partial model without unconserved sides chains): PDB file : Tito_3VGA.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3VGA-query.scw PDB file : Tito_Scwrl_3VGA.pdb: