Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSTCTNSTRESNSSHTCMPLSKMPISLAHGIIRSTVLVIFLA-ASFVGNIVLALVLQRKPQLLQVTNRFIFNLLVTDLLQISLVAPWVVATSVPL-FWPLNSHFCTALVSLTHLFAFASVNTIVVVSVDRYLSIIHPLSYPSKMTQRRGYLLLYGTWIVAILQSTPPLYGWGQAAFDERN---ALCSMIWGASPSYTILSVVSFIVIPLIVMIACYSVVFCAARRQHALLYNVKRHSLEVRVKDCVENEDEEGAEKKEEFQDESEFRRQHEGEVKAKEGRMEAKDGSLKAKEGSTGTSESSVEARGSEEVRESSTVASDGSMEG--KEGSTKVEENSMKADKGRTEVNQCSIDLGEDDMEFGEDDINFSED---DVEAVNIPESL----PPSR--------RNSNSNPPLPRCYQCKAAKVIFIIIFSYVLSLGPYCFLAVLAVWVDVETQVPQWVITIIIWLFFLQCCIHPYVYGYMHKTIKKEIQDMLKKFFCKEKPPKEDSHPDLPGTEGGTEGKIVPSYDSATFP |
| 4U14 Chain:A ((21-442)) | ----------------------------------------FLALVTIIGNILVIVAFKVNKQLKTVNNYFLLSLACADLI-IGVISMNLFTTYIIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLAWVISFVLWAPAILFW-QYFVGKRTVPPGECFIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIY-----------------KETEKMNCFEMLRIDEGLRLKIYKDCEGYYTIGIGHLLTKSPSLNAAKSEL---DKAIGRNTNGVITKDEAEKLFNQDV--DAAVRGILRNAKLKPVYDSLDAVRRCALINMV-FQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQCPNRAKRVITTFRTGTWDAYLIK--EKKAAQTLSAILLAFIITWTPYNIMVLVNTFCD--SCIPKTYWNLGYWLCYINSTVNPVCYALCNKTFRTTFKTLLL-------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4U14.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -160088 for 2969 contacts (-53.9/contact) +
2D Compatibility (PS) -40486 + (NN) -5588 + (LL) 5440
1D Compatibility (HY) -35600 + (ID) 4550
Total energy: -240872.0 ( -81.13 by residue)
QMean score : 0.193
|
|
|