Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESSFSFGVILAVLASLIIATNTLVAVAVLLLIHKNDGVSLCFTLNLAVADTLIGVAISGLLTDQLSSPSRPTQKTLCSLRMAFVTSSAAASVLTVMLITFDRYLAIKQPFRYLKIMSGFVAGACIAGLWLVSYLIGFLPLGIPMFQQT-------AYKGQCSFFAVFHPHFVLTLSCVGFFPAMLLFVFFYCDMLKIAS------------MHSQQIRKMEHAGAMAGGYRSPRTPSDFKALRTVSVLIGSFALSWTPFLITGIVQVACQEC---HLYLVLERYLWLLGVGNSLLNPLIYAYWQKEVRLQLYHMALGVKKVLTSFLLFLSARNCGPERPRESSCHIVTISSSEFDG |
| 3SN6 Chain:R ((186-475)) | -------GIVMSLIVLAIVFGNVLVITAIAKF-ERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYR--QEAINCYAEETCCDFFT--NQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGR-----------------------CLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLN---W-IGYVNSGFNPLIYCRSPDFRIAFQELLC----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219409 for 1792 contacts (-122.4/contact) +
2D Compatibility (PS) -24673 + (NN) -10685 + (LL) 6760
1D Compatibility (HY) -30000 + (ID) 3600
Total energy: -281607.0 ( -157.15 by residue)
QMean score : 0.311
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