Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITLNNQDQPVPFNSSHPDEYKIAALVFYSCIFIIGLFVNITALWVFSCTTKKRTTVTIYMMNVALVDLIFIMTLPFRMFYYAK-DEWPFGEYFCQILGALTV--FYPSIALWLLAFISADRYMAIVQP-KYAKELKNTCKAVLACVGVWIMTLTTTTPLLLLYKDPDKDSTPATCLKISDIIYLKAVNVLNLTRLTFFFLIPLFIMIGCYLVIIHNLLHGRTSKLKPKVKEKSIRIIITLLVQVLVCFMPFH-ICFAFLMLGTG------ENSYNPWGAF--TTFLMNLSTCLDVILYYIVSKQFQARVISVMLYRNYLRSMRRKSFRSGSLRSLSNINSEML |
| 2LNL Chain:A ((39-320)) | ---------------------KYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLP--IWAASKVNGWIFGTFLCKVVSLLKEVNFYSGIL--LLACISVDRYLAIVHATRTLTQKRHLVKFV--CLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQ-----KHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203790 for 1937 contacts (-105.2/contact) +
2D Compatibility (PS) -26850 + (NN) -5546 + (LL) 3332
1D Compatibility (HY) -34800 + (ID) 3850
Total energy: -271504.0 ( -140.17 by residue)
QMean score : 0.262
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