Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MACNSTSLEAYTYLLLNTSNASDSGSTQLPAPLRISLAIVMLLMTVVGFLGNTVVCIIVYQRPAMRSAINLLLATLAFSDIMLSLCCMPFTAVTLITVRWHFGDHFCRLSATLYWFFVLEGVAILLIISVDRFLIIV---QRQDKLNPRRAKVIIAVSWVLSFCIAG-PSLTGWTLVEVPARAPQCVL--GYTELPADRAYVVTLVVAVFFAPFGVMLCAYMCILNTVRKNAVRVHNQSDSLDLRQLTRAGLRRLQRQQQVSVDLSFKTKAFTTILILFVGFSLCWLPHSVYSLLSVFSQRFYCGSSFYATSTCVLWLSYLKSVFNPIVYCWRIKKFREACIELLPQTFQILPKVPERIRRRIQPSTVYVCNENQSAV |
4BVN Chain:A ((7-300)) | -------------------------SQQWEAGMSLLMALVVLLIVA----GNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASVETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDP-QALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFV-----------ALRVYREAKE-QIR------KRKTSR-----VMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPKWLFVAFN----WLGYANSAMNPIILC-RSPDFRKA--------FKRLLA------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -280418 for 2124 contacts (-132.0/contact) +
2D Compatibility (PS) -28161 + (NN) -1917 + (LL) 7044
1D Compatibility (HY) -30400 + (ID) 4500
Total energy: -338352.0 ( -159.30 by residue)
QMean score : 0.249
|
|
|