Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANSTGLNASEVAGSLGLILAAVVEVGALLGNGALLVVVLRTPGLRDALYLAHLCVVDLLAAASIMPLGLLAAPPPGLGRVRLG-PAPCRAARFLSAALL---PACTLGVAALGLARYRLIVHPLR-----PGSRPPPVLVLTAVWAAAGLLGALSLLGTPPAPPPAPARCSVLAGGLG----------PFRPLWALLAFA---LPALLLLGAYGGIFVVARRAALR-PPRPARGSRLHSDSLDSRLSILPPLRPRLPGGKAALAPALAVGQFAACWLP-YGCACLAPAARAAEAEAAVTWVAYSAF-------AAHPFLYGLLQRPVRLALGRLSRRALPGPVRACTPQAWHPRALLQCLQRPPEGPAVGPSEAPEQTPELAGGRSPAYQGPPESSLS |
| 3RFM Chain:A ((7-304)) | --------------SVYITVELAIAVLAILGNVLVCWAVWLNSNLQN---VTNYFVVSL-AAADIL-VGVLAIPFAI--TISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAIC--WVLSFAIGLTPMLGWNNCGQP--------GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARS-----------TLQKEVHAAKSA---AIIAGLFALCWLPLHIINCF--TFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163284 for 1784 contacts (-91.5/contact) +
2D Compatibility (PS) -26799 + (NN) -11400 + (LL) 4432
1D Compatibility (HY) -22800 + (ID) 4000
Total energy: -223851.0 ( -125.48 by residue)
QMean score : 0.179
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