Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERAPPDGPLNASGALAGEAAAAGGARGFSAAWTAVLAALMALLIVATVLGNALVMLAFVADSSLRTQNNFFLLNLAISDFLVGAFCIPLYVPYVLTGRWTFGRGLCKLWLVVDYLLCTSSAFNIVLISYDRFLSVTRAVSYRAQQGDTRRAVRKMLLVWVLAFLL-YGPAILSWEYLSGGSSIPEGHCYAE-----FFYNWYFLITASTLEFFTPFLSVTFFNLSIY------LNIQRRTR----LRLDGAREAAG---------PEPPPEAQPSPPPPPGCWGCWQKG---HGEAMPLHRYGVGEAAVGA-----------------EAGEATLGGGGGGGSVASPTSSSG--SSSRGTERPRSLKRGSKPSASSASLEKRMKMVSQSFT---QRFRLSRDRKVAKSLAVIVSIFGLCWAPYTLLMIIRAACHGHCVPDYWYETSFWLLWANSAVNPVLYPLCHH-SFRRAFTKLLCPQKLKIQPHSSLEHCWK |
| 3PDS Chain:A ((5-446)) | -----------------------------DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAACILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARV-IILMVWIVSGLTSFLPIQMHWYRATHQEAI---NCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAK-SRWYNQTPNRAKRVITTFRTGTWDAYKFCL-KEHKALKTLGIIMGTFTLCWLPFFIVNIVHVI-QDNLIRKEVYILLNWIGYVNSGFNPLIY--CRSPDFRIAFQELLCL---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192070 for 2729 contacts (-70.4/contact) +
2D Compatibility (PS) -39888 + (NN) -4230 + (LL) 1740
1D Compatibility (HY) -34400 + (ID) 5600
Total energy: -274448.0 ( -100.57 by residue)
QMean score : 0.180
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